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MobaXterm (Windows terminal client)

 

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Using MobaXterm with JASMIN

Windows users are recommended to try the 3rd party application MobaXterm for connecting to JASMIN from Windows. Please note its licence conditions for ongoing use, however.

Versions of MobaXterm  

The instructions given below are for version 24 of MobaXterm. For other versions please check the MobaXterm documentation.

The method of configuring MobaXterm to store your private key has changed with different versions. The recommended method, and an alternative, are shown below.

Downloading and installing MobaXterm  

Visit the MobaXterm website  to download the free Home edition.

There are 2 editions available:

  • “Portable” edition (can be installed as a regular user)
  • “Installer” edition (may need admin privileges on your machine)

Both editions should be functionally the same once installed, but your choice may depend on what level of access you have to your Windows machine.

For the “portable” edition, the contents of the downloaded zip file should be extracted to a folder (eg. on your Windows desktop) where you can double-click the executable file MobaXterm_Personal_xx.x (where xx.x is the version number). Note that the CygUtils.plugin file should remain in this folder as this is used for storing settings.

Once opened, MobaXterm presents a screen like this:

MobaXterm's initial screen
MobaXterm's initial screen

You can use the Start local terminal button or click the + tab to open multiple tabs with a different terminal session in each tab. However, it’s worth setting up MobaXterm so that your private key is held globally and is available to any new terminal session that you open.

Enabling MobAgent to store your private key  

In order to log in to a remote host (e.g. a JASMIN host) you need to present your private key which is kept your local machine. MobaXterm provides MobAgent which can store your key for the time you are running MobaXterm, and can then present it for you, for any session in any tab, so you don’t have to enter your passphrase for each new tab that you open.

Video demonstration  

The video below demonstrates this process, or you can follow the screenshots which follow:

Steps with screenshots  

You need to enable MobAgent in Settings > Configuration > SSH:

SSH Configuration tab
SSH Configuration tab

To do this:

  • Tick Use internal SSH agent "MobAgent"
  • Un-tick Use external Pageant
  • Click the + symbol to locate your private key file (e.g. id_ecdsa_jasmin)
  • Click OK to save the settings. MobaXterm will now need to restart.
  • When you restart MobaXterm you will be prompted for the passphrase associated with your private key.
Private key passphrase prompt
Private key passphrase prompt

Once MobaXterm has started, you can check that your SSH key has been loaded by clicking on Start local terminal and using ssh-add -l to list the keys currently loaded.

When you type the following command in the MobaXterm terminal, you should see output similar to below:

ssh-add -l
521 SHA256:ZeddNKK5U3am1vyCaUCq4CgMRpvoyv+cJiviqz3zvfw ~/.ssh/id_ecdsa_jasmin (ECDSA)

Sometimes the last part of this output shows your email address, but it is just a comment field at the end of the key, which can be ignored. The fact that it’s returned something which looks like a key “fingerprint”, shows that your key is loaded successfully into the agent.

If you don’t see your key listed in output similar to the above, please try again: perhaps you entered the wrong passphrase? But you will need to succeed in loading your key before you can connect to JASMIN.

Logging in to JASMIN using key stored in MobAgent  

As shown in the video above, once you have set up MobAgent you can connect to JASMIN by creating a new terminal window. Click the Start local terminal button.
Next, try connecting to the login server:

ssh -A <user_id>@login-01.jasmin.ac.uk

Notes:

  • replace <user_id> with your own JASMIN username)
  • check the list of available login servers: you don’t have to use the one above!

Logging in to JASMIN without storing your key in MobAgent  

MobAgent provides the most convenient way of accessing JASMIN. However, if you want to login to JASMIN without setting up MobAgent you can do so as follows.

Click on the Start local terminal button then enter the following command. The final two lines show the output you should see: you are prompted for your key’s passphrase, then if successful, you see confirmation that the key is loaded.

eval $(ssh-agent -s)
ssh-add ~/.ssh/id_ecdsa_jasmin
Enter passphrase for ~/.ssh/id_ecdsa_jasmin:
Identity added: ~/.ssh/id_ecdsa_jasmin

If your key is named something different, or stored at a different location than shown above, you will need to specify its location in the ssh-add command. Note that MobaXterm refers to Windows drives as e.g. /drives/c/ (with forward slashes). So if you’ve put your key on your desktop, then the path to that might be /drives/c/Users/fred/Desktop/id_ecdsa_jasmin (if “fred” is your local username on Windows).

You will need to do this each time you open a new terminal session. To connect to JASMIN:

ssh -A <user_id>@login-01.jasmin.ac.uk

Again, you must replace <user_id> with your JASMIN username.

As you can see, the MobAgent method mentioned previously makes this a bit easier, because it persists between sessions and you navigate to the location of your private key using graphical tools instead of having to type the path.

Additional MobaXterm features  

MobaXterm is a comprehensive application that enables many useful features such as:

  • Saved session configurations
  • X-forwarding / X11 / X server (Not recommended on JASMIN, see NoMachine NX for graphical linux desktop instead)
  • SSH agent forwarding
  • SFTP access (with graphical drag-n-drop)
  • Split-tab mode
  • SSH tunnelling
  • Basic Linux commands such as: cd, ls, pwd, cat
  • Command-line transfer utilities: scp, rsync, wget

Please see the MobaXterm documentation  for details on these.

Last updated on 2025-08-19 as part of:  prototype of v1.10.0 (c86b5ad18)
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