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    • reset jasmin account password
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    • understanding new jasmin storage
    • update a jasmin account
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    • interactive computing overview
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    • graphical linux desktop access using nx
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    • tenancy sci analysis vms
    • transfer servers
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    • jasmin notebooks service with gpus
    • creating a virtual environment in the notebooks service
    • project specific servers
    • dask gateway
    • access from vscode
  • batch computing
    • lotus overview
    • slurm scheduler overview
    • slurm queues
    • lotus cluster specification
    • how to monitor slurm jobs
    • how to submit a job
    • how to submit an mpi parallel job
    • example job 2 calc md5s
    • orchid gpu cluster
    • slurm status
    • slurm quick reference
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    • software overview
    • quickstart software envs
    • python virtual environments
    • additional software
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    • conda removal
    • creating and using miniforge environments
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    • jasmin software faqs
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    • nag library
    • name dispersion model
    • geocat replaces ncl
    • postgres databases on request
    • running python on jasmin
    • running r on jasmin
    • rocky9 migration 2024
    • share software envs
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    • data transfer tools
    • globus transfers with jasmin
    • bbcp
    • ftp and lftp
    • globus command line interface
    • globus connect personal
    • gridftp ssh auth
    • rclone
    • rsync scp sftp
    • scheduling automating transfers
    • transfers from archer2
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    • apply for access to a gws
    • elastic tape command line interface hints
    • faqs storage
    • gws etiquette
    • gws scanner ui
    • gws scanner
    • gws alert system
    • install xfc client
    • xfc
    • introduction to group workspaces
    • jdma
    • managing a gws
    • secondary copy using elastic tape
    • share gws data on jasmin
    • share gws data via http
    • using the jasmin object store
    • configuring cors for object storage
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    • ceda archive
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    • how to apply for mass access
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    • cluster as a service pangeo
    • cluster as a service shared storage
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    • best practice
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    • using cron
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  1.   Software on JASMIN
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  4. Community Software: checksit

Community Software: checksit

 

Community   Software  
Community   Software  
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Community Software: checksit

On this page
Overview   Features   Use on JASMIN   Further information  

Overview  

checksit is a tool that checks the structure and content of a file against a range of available checks. Checks can be made using either “spec” files defining rules that objects within a file must meet, or comparison against a template file.

Whilst initial development focussed around the standards developed for NCAS data, checksit can be adapted to check files against any desired requirements.

Features  

Currently, checksit can:

  • use spec files and define rules against which to check files
  • check a file against a given template file
  • check for compliance against NCAS-GENERAL-2.0.0 and NCAS-IMAGE-1.0 standards
  • output in either “standard” mode or a one line “compact” mode
  • summarise output from multiple “compact” mode file checks

Work in progress includes:

  • check for compliance against other NCAS standards (e.g. NCAS-RADAR)
  • check against future versions of standards (NCAS-GENERAL-2.1.0 and NCAS-IMAGE-1.1)
  • allow user defined specs and rules
  • Visit the GitHub repository linked at the bottom of this page for further information on what is being worked on.

Use on JASMIN  

checksit is available on all sci machines. To check a file in your current directory:

/apps/jasmin/community/checksit/checksit check name-of-file.ext

For a complete guide on how to use checksit, please visit the documentation site linked at the bottom of this page.

Further information  

Documentation: https://checksit.readthedocs.io/en/latest/ 

GitHub: https://github.com/cedadev/checksit 

Last updated on 2024-02-10 as part of:  content updates (d28235d34)
On this page:
Overview   Features   Use on JASMIN   Further information  
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