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    • creating a virtual environment in the notebooks service
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  • batch computing
    • lotus overview
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    • how to submit a job
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    • example job 2 calc md5s
    • orchid gpu cluster
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    • slurm quick reference
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    • software overview
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    • python virtual environments
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    • community software esmvaltool
    • community software checksit
    • compiling and linking
    • conda environments and python virtual environments
    • conda removal
    • creating and using miniforge environments
    • idl
    • jasmin sci software environment
    • jasmin software faqs
    • jaspy envs
    • matplotlib
    • nag library
    • name dispersion model
    • geocat replaces ncl
    • postgres databases on request
    • running python on jasmin
    • running r on jasmin
    • rocky9 migration 2024
    • share software envs
  • data transfer
    • data transfer overview
    • data transfer tools
    • globus transfers with jasmin
    • bbcp
    • ftp and lftp
    • globus command line interface
    • globus connect personal
    • gridftp ssh auth
    • rclone
    • rsync scp sftp
    • scheduling automating transfers
    • transfers from archer2
  • short term project storage
    • apply for access to a gws
    • elastic tape command line interface hints
    • faqs storage
    • gws etiquette
    • gws scanner ui
    • gws scanner
    • gws alert system
    • install xfc client
    • xfc
    • introduction to group workspaces
    • jdma
    • managing a gws
    • secondary copy using elastic tape
    • share gws data on jasmin
    • share gws data via http
    • using the jasmin object store
    • configuring cors for object storage
  • long term archive storage
    • ceda archive
  • mass
    • external access to mass faq
    • how to apply for mass access
    • moose the mass client user guide
    • setting up your jasmin account for access to mass
  • for cloud tenants
    • introduction to the jasmin cloud
    • jasmin cloud portal
    • cluster as a service
    • cluster as a service kubernetes
    • cluster as a service identity manager
    • cluster as a service slurm
    • cluster as a service pangeo
    • cluster as a service shared storage
    • adding and removing ssh keys from an external cloud vm
    • provisioning tenancy sci vm managed cloud
    • sysadmin guidance external cloud
    • best practice
  • workflow management
    • rose cylc on jasmin
    • using cron
  • uncategorized
    • mobaxterm
    • requesting resources
    • processing requests for resources
    • acknowledging jasmin
    • approving requests for access
    • working with many linux groups
    • jasmin conditions of use
  • getting started
    • get started with jasmin
    • generate ssh key pair
    • get jasmin portal account
    • get login account
    • beginners training workshop
    • how to contact us about jasmin issues
    • jasmin status
    • jasmin training accounts
    • tips for new users
    • how to login
    • multiple account types
    • present ssh key
    • reconfirm email address
    • reset jasmin account password
    • ssh auth
    • storage
    • understanding new jasmin storage
    • update a jasmin account
  • interactive computing
    • interactive computing overview
    • check network details
    • login servers
    • login problems
    • graphical linux desktop access using nx
    • sci servers
    • tenancy sci analysis vms
    • transfer servers
    • jasmin notebooks service
    • jasmin notebooks service with gpus
    • creating a virtual environment in the notebooks service
    • project specific servers
    • dask gateway
    • access from vscode
  • batch computing
    • lotus overview
    • slurm scheduler overview
    • slurm queues
    • lotus cluster specification
    • how to monitor slurm jobs
    • how to submit a job
    • how to submit an mpi parallel job
    • example job 2 calc md5s
    • orchid gpu cluster
    • slurm status
    • slurm quick reference
  • software on jasmin
    • software overview
    • quickstart software envs
    • python virtual environments
    • additional software
    • community software esmvaltool
    • community software checksit
    • compiling and linking
    • conda environments and python virtual environments
    • conda removal
    • creating and using miniforge environments
    • idl
    • jasmin sci software environment
    • jasmin software faqs
    • jaspy envs
    • matplotlib
    • nag library
    • name dispersion model
    • geocat replaces ncl
    • postgres databases on request
    • running python on jasmin
    • running r on jasmin
    • rocky9 migration 2024
    • share software envs
  • data transfer
    • data transfer overview
    • data transfer tools
    • globus transfers with jasmin
    • bbcp
    • ftp and lftp
    • globus command line interface
    • globus connect personal
    • gridftp ssh auth
    • rclone
    • rsync scp sftp
    • scheduling automating transfers
    • transfers from archer2
  • short term project storage
    • apply for access to a gws
    • elastic tape command line interface hints
    • faqs storage
    • gws etiquette
    • gws scanner ui
    • gws scanner
    • gws alert system
    • install xfc client
    • xfc
    • introduction to group workspaces
    • jdma
    • managing a gws
    • secondary copy using elastic tape
    • share gws data on jasmin
    • share gws data via http
    • using the jasmin object store
    • configuring cors for object storage
  • long term archive storage
    • ceda archive
  • mass
    • external access to mass faq
    • how to apply for mass access
    • moose the mass client user guide
    • setting up your jasmin account for access to mass
  • for cloud tenants
    • introduction to the jasmin cloud
    • jasmin cloud portal
    • cluster as a service
    • cluster as a service kubernetes
    • cluster as a service identity manager
    • cluster as a service slurm
    • cluster as a service pangeo
    • cluster as a service shared storage
    • adding and removing ssh keys from an external cloud vm
    • provisioning tenancy sci vm managed cloud
    • sysadmin guidance external cloud
    • best practice
  • workflow management
    • rose cylc on jasmin
    • using cron
  • uncategorized
    • mobaxterm
    • requesting resources
    • processing requests for resources
    • acknowledging jasmin
    • approving requests for access
    • working with many linux groups
    • jasmin conditions of use
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About this site

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Information about this documentation site itself.

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About this site  

We hope you like our new-look help docs which make use of richer formatting to make the articles easier to read, particularly those with code snippets or command-line instructions. We’ve also changed the way we manage the source content so it’s easier for us to maintain. There’s still more to do, to re-organise some of the content and add new pages to reflect how JASMIN is evolving. This site should redirect you from any previous URLs you may have stored, but please use the following features to help you navigate around the site:

  • main navigation bar along the top of the site, including search tool
  • breadcrumbs menu, to show you where you are in the site
  • collapsible sidebar, left side panel (docs pages only)
  • icons, to identify articles within the same section
  • table of contents, right side panel
  • hover over sub-headings to reveal a bookmark-able link to that heading
  •   tags to group together articles covering similar topics
  • links between articles

Issues with this site  

If you spot any broken links or incorrect information, please let us know by opening an issue in the GitHub repository for this site’s source code:

Report issues with this site  

The date of update date and commit message for each page should be just above the footer of each page.

Other issues  

For all other reports of problems, or for any information you can’t find (don’t forget the other JASMIN sites linked in the footer!), please use the contact form via “Ask” in the JASMIN Help beacon (bottom right, orange button) and use the contact form to send a message to the helpdesk: this is the best method to get in touch. Note that the beacon no longer contains the links to the help docs themselves, but still provides the contact form. Hopefully the other navigation features described above should enable you to find what you need.

Last updated on 2024-02-29 as part of:  fixed typo (36e200e8b)
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